Topic outline

  • General

    Workshop on Epigenomics data analysis

    30 June - 1 July 2022, Centre de conférences et de séminaires, Caux Palace / Montreux


    Course schedule

    Program:

    Day 1: June 30th 9h00-12h30 13h30-17h00

    . 9h00 - 9h30 : General introduction to the data for epigenomics

    . 9h30 - 10h45 : Prokaryotic DNA methylation (PacBio, etc.) (Laurent Falquet)

    . Coffee break 10h45-11h

    . 11h00 - 12h30: Prokaryotic DNA methylation: hands-on (Laurent Falquet)

    . 12h30 - 13h30: lunch break

    . 13h30 - 14h30: Eukaryotic DNA methylation (bisulfite sequencing and/or EMseq) (Mario Iurlaro)

    . 14h30 - 14h40: short break

    . 14h40 - 17h00 : Eukaryotic DNA methylation: hands-on (Mario Iurlaro)
    with a coffe break in the middle.


    Day 2: July 1st / 9h00-12h30 13h30-17h00

    . 09h00 - 10h00: Histone modification and chromatine re-arrangement (Guido Van Mierlo)

    . 10h00 - 12h30: Histone modification and chromatine re-arrangement: Hand-on. with Coffee break around 10h40.

    . 12h30 - 13h30: Lunch break

    . 13h30 - 17h00 : Cancer epigenomics: data visualization (Philipp Bucher), lectures + hands-on with Coffee break 15h20-15h40


    Requirements: a Mac or PC with RStudio installed.

    • instructions

      Day 1 - Session 1


      Day 1 - Session 2


      Day 2 - Session 1


      Day 2 - Session 2

      • Course slides & exercises