Topic outline

  • General

    NGS - Genome Variant Analysis

    30 - 31 March 2021

    Streamed

    This page is addressed to registered participants. To access course description and application form, please click here.

    This course will be taught by Geert van Geest, for any assistance, please contact training@sib.swiss.

  • Programme

    Day 1 - 9h to 17h

    Morning

    • Introduction to Variant discovery
    • Server login + unix fresh up

    Afternoon

    • Read alignment - basics
    • Read alignment - advanced

    Day 2 - 9h to 17h

    Morning

    • Variant calling
    • Visualisation

    Afternoon

    • Filtering & evaluation
    • Annotation

    • EXAM