SIB PhD Training Network Retreat 2017
Section outline
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SIB PhD Training Network Retreat - 10 Years
Bienne/Biel, 25-27 September 2017
The annual retreats are exclusively reserved to the Training Network (TN) members and combine, in a relaxed atmosphere, interactive sessions in which the students can both present their work as well as network with their peers and with a speaker/tutor, usually a Group Leader from a Swiss University. Furthermore, we organize a social/fun activity.
This year we are very happy to invite the following speakers:
- Prof. Christophe Dessimoz, Department of Ecology and Evolution, University of Lausanne; Computational Evolutionary Biology and Genomics, SIB Swiss Institute of Bioinformatics.
- Prof. Bart Deplancke, Laboratory of Systems Biology and Genetics (LSBG), EPFL and SIB Swiss Institute of Bioinformatics.
LOCATION
Best Western Hotel Continental, Bienne/Biel
PRELIMINARY PROGRAM:
Day 1- 25.09.
09:30 - 10:00 Arrival & check in
10:00 - 10:10 Welcome
10:10 - 11:10 Students' presentations 1 to 3
11:10 - 11:40 Coffee / networking break
11:40 - 12:20 Students' presentations 4 to 5
12:30 - 14:00 Lunch
14:00 - 15:00 Technical presentations
15:00 - 15:20 Student's presentations 6
15:20 - 16:00 Coffee / networking break
16:00 - 17:00 Students' presentations 7 to 9
19:00 Departure for dinnerDay 2 - 26.09.
09:00 - 10:30 Guests' session
10:30 - 11:00 Coffee / networking break
11:00 - 12:30 Guests' session
12:30 - 14:00 Lunch
14:00 - 15:10 Students' presentations 10 to 12
15:10 - 15:30 Coffee / networking break
15:30 - 16:00 Students' presentations 13
16:30 Departure to social activity
17:00 - 18:45 Laser Game
19:00 Back to hotel
20:15 Departure for dinnerDay 3 - 27.09.
<09:00 Checkout
09:00 - 10:30 Students' presentations 14 to 17
10:30 - 11:00 Coffee / networking break + checkout
11:20 - 11:45 Students' presentations 18
11:45 - 12:15 Christophe's talk
12:15 - 13:30 Lunch
13:30 - 14:30 Conclusion + PhD TN annual assembly
14:30 End of the meetingPresenters' list:
1. Alexis Loetscher - A diversity study of the Epstein-Barr virus in HIV-infected patients
2. Mahmoud Hallal - Characterization of Kinase Activity by Phosphoproteomics in Myeloid Cell Lines for Identification of Driving Oncogenic Pathways
3. Arka Banerjee - No title
4. Amel Bekkar - Logical modeling of cardiovascular disease
5. Lorenzo Gatti - Phylogenetic tree optimisation under the Poisson Indel Process model
6. Nan Papili Gao - Identification of cell state transitions from single-cell expression data using a two-state model-based clustering algorithm
7. Maxime Jan - Identify and visualize molecular pathways underlying the sleep homeostatic process using a systems genetics approach
8. Ana Claudia Sima - BioSODA – enabling complex semantic search across bioinformatics databases
9. Hamed Khakzad - Measuring protein-protein interactions in complex samples by targeted chemical cross-linking mass spectrometry
10 . Francisco Brito - Characterizing the virome of platelet concentrates using shotgun metagenomics
11. Mathieu Seppey - Establishing an unbiased, reproducible and evolvable benchmarking resource for metagenomic tools
12. Anna Klimovskaia - Inferring Causal Relationships in Stochastic Chemical Reaction Networks from Single-cell Snapshot Time Series
13. Paula Carrio Cordo - arrayMap database expansion & statistical analysis of Medulloblastoma
14. Qingyao Huang - Integrative analysis of cancer genome profiling data to study the interplay of genetic background and molecular mechanisms in cancer
15. Monica Ticlla Ccenhua - Microbiome of the Lower Respiratory Tract in TuberculosisMathieu Seppey - Establishing an unbiased, reproducible and evolvable benchmarking resource for metagenomic tools
16. Ninon Mounier - Genetics of Aging - Increase in power of detection by combining different sources of information
17. Bo Gao - Identify driver genes based on multi-omics data
18. Mattia Tomasoni - No title
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Team ready for the game...
After the game :-)
