Topic outline

  • Enrichment analysis

    Lausanne, 21 March 2018

    University of Lausanne, Genopode building, room 2020

    This page is addressed to registered participants. To access course description and application form, please click here.

    For any assistance, please contact training@sib.swiss.

    • Schedule

      9:00  - 10:30    

      Recall:

      a. Differential expression

      b. Statistical tests

      Exercise

      10:30  - 10:45    coffee break

      10:45  - 12:30    

      Threshold-based versus Threshold-free enrichment

      GSEA advantages and drawbacks

      Classification of available gene enrichment methods

      Exercise

      12:30  - 13:30  lunch (on your own)

      13:30  - 15:30   

      Generalizing enrichment

      Exercice

      15:30  - 15:45  coffee break

      15:45  - 17:00  

      Ontologies and enrichment

      Exercise

      17:00    end of day

      • Course material

        The course slides will be available to download before the course starts.