Section outline

  • 9:00  - 10:30    

    Recall:

    a. Differential expression

    b. Statistical tests

    Exercise

    10:30  - 10:45    coffee break

    10:45  - 12:30    

    Threshold-based versus Threshold-free enrichment

    GSEA advantages and drawbacks

    Classification of available gene enrichment methods

    Exercise

    12:30  - 13:30  lunch (on your own)

    13:30  - 15:30   

    Generalizing enrichment

    Exercice

    15:30  - 15:45  coffee break

    15:45  - 17:00  

    Ontologies and enrichment

    Exercise

    17:00    end of day