Section outline

  • Day 1

    8.30 - 8.45 Welcoming

    8.45 - 9.45 Session 1 : Debora Gasperini - Biological background, EMS mutagenesis, designing screens, importance of ploidy,..

    9.45 - 10.00 Coffee break

    10.00 - 11.00 Session 1 (second part)

    11.00 - 12.00 Session 2 : Laurent Falquet - Genome sequencing and assembly

    12.00 - 13.00 lunch break

    13.00 - 14.00 Session 2 (second part)

    14.00 - 15.00 Session 3 (first part)

    15.00 - 15.15 coffee break

    15.15 - 16.15 Session 3 : Hannes Svardal - SNP detection and analysis

    16.15 - 17.00  preparations for the hands-on part

    Day 2

    9.00 - 16.00: Practicals

    • raw sequencing read analysis
    • read mapping onto the ATH genome
    • haplotype calling & SNP detection
    • SNP evaluation

    Coffee break: 09h45, 14h40
    Lunch break: 12h00